The genetic coordinate for the HumanCoreExome-12v1-1 array was taken from the file "HumanOmni2.5-4v1_H_Physical-and-Genetic-Coordinates.txt" (date: 2011-05-11)
available on http://support.illumina.com/downloads/humanomni25-quad_product_support_files.ilmn
Genetic positions for the pseudoautosomal region XY was not given. Here 1cM = 1Mb was used.
In cases where two markers have the same physical position (> 7000 doubled markers), but different names,  
the marker with a RS-number was taken.


HumanCoreExome-12v1-1_map_deCode_rs-only.zip:
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247204 markers/SNPs with a RS-number which overlap between HumanOmni2.5 and HumanCoreExome-12v1-1.
Genetic coordinate is in deCODE cM. 
Physical position is b37/hg19.
Markers from the MT and Y chromosome were removed

HumanCoreExome-12v1-1_map_deCode_286566.zip:
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286566  markers/SNPs which overlap between HumanOmni2.5 and HumanCoreExome-12v1-1.
Genetic coordinate is in deCODE cM. 
Physical position is b37/hg19.

Franz Rueschendorf, 2014-04-29